Balisage Paper: Human Readability of Data Files
August 1 - 5, 2022
The materials listed below were provided by the speaker as supplements to a
presentation at Balisage. These materials may include the slides or visuals used in
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presentation; supplementary material, such as code samples or a demonstration application;
and/or the paper accompanying the presentation (if it has not been provided in XML).
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Slides and Materials
- Bal2022-Gryk-presentation-pptx.zip: Presentation slides in Microsoft PowerPoint (pptx)
Gryk, Michael R. Deconstructing the STAR File Format
.
Presented at Balisage: The Markup Conference 2021, Washington, DC, August 2 - 6, 2021.
In Proceedings of Balisage: The Markup Conference 2021.
Balisage Series on Markup Technologies, vol. 26 (2021).
doi:https://doi.org/10.4242/BalisageVol26.Gryk01
Hall, S.R. The STAR File: A New Format for Electronic Data Transfer and Archiving
.
J. Chem. Inf. Comput.,
31, 326-333 (1991). doi:https://doi.org/10.1021/ci00002a020
Wrightson, A. Semantics of Well Formed XML as a Human and Machine Readable Language: Why is some
XML so difficult to read?
Proceedings of Extreme Markup Languages 2005,
2005.
Flesch, R. A new readability yardstick
.
Journal of Applied Psychology,
32, 221–233 (1948).
doi:https://doi.org/10.1037/h0057532
Seuss. Green Eggs and Ham. New York, NY: Beginner Books, 1960.
Fry, Edward. A Readability Formula That Saves Time
.
Journal of Reading,
11, 513-578 (1968).
McLaughlin, G.H. SMOG Grading — A New Readability Formula
.
Journal of Reading,
12, 639-646, (1969).
Protein Data Bank (original pdb format). https://www.wwpdb.org/documentation/file-format-content/format33/sect9.html
Ulrich, E.L., Akutsu, H., Doreleijers, J.F., Harano, Y., Ioannidis, Y.E., Lin, J.,
Livny, M., Mading, S.,
Maziuk, D., Miller, Z., Nakatani, E., Schulte, C.F., Tolmie, D.E., Wenger, R.K., Yao,
H. & Markley, J.L.
BioMagResBank
. Nucleic Acids Research, 36, D402–D408 (2008).
doi:https://doi.org/10.1093/nar/gkm957